Blar i Artikkel - fagfellevurdert vitenskapelig / Articles - peer-reviewed på tidsskrift "Frontiers in Microbiology"
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A culture-, amplification-independent, and rapid method for identification of pathogens and antibiotic resistance profile in bovine mastitis milk
(Peer reviewed; Journal article, 2023)Introduction: Rapid and accurate diagnosis of causative pathogens in mastitis would minimize the imprudent use of antibiotics and, therefore, reduce the spread of antimicrobial resistance. Whole genome sequencing offers a ... -
Fighting Antibiotic Resistance in Hospital-Acquired Infections: Current State and Emerging Technologies in Disease Prevention, Diagnostics and Therapy
(Peer reviewed; Journal article, 2021)Rising antibiotic resistance is a global threat that is projected to cause more deaths than all cancers combined by 2050. In this review, we set to summarize the current state of antibiotic resistance, and to give an ... -
Highly sensitive quantitative phase microscopy and deep learning aided with whole genome sequencing for rapid detection of infection and antimicrobial resistance
(Peer reviewed; Journal article, 2023)Current state-of-the-art infection and antimicrobial resistance (AMR) diagnostics are based on culture-based methods with a detection time of 48–96 h. Therefore, it is essential to develop novel methods that can do real-time ... -
Perspectives of Microbial Inoculation for Sustainable Development and Environmental Management
(Peer reviewed; Journal article, 2018)How to sustainably feed a growing global population is a question still without an answer. Particularly farmers, to increase production, tend to apply more fertilizers and pesticides, a trend especially predominant in ... -
Phylogeny-and abundance-based metrics allow for the consistent comparison of core gut microbiome diversity indices across host species
(Peer reviewed; Journal article, 2021)The filtering of gut microbial datasets to retain high prevalence taxa is often performed to identify a common core gut microbiome that may be important for host biological functions. However, prevalence thresholds used ... -
Questioning the Quality of 16S rRNA Gene Sequences Derived From Human Gut Metagenome-Assembled Genomes
(Peer reviewed; Journal article, 2022)The recent introduction of metagenome-assembled genomes (MAGs) has marked a major milestone in the human gut microbiome field (Almeida et al., 2019; Nayfach et al., 2019; Pasolli et al., 2019). Such reference-free, de ...